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SRX21505144: GSM7744839: R017; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 4000) run: 91.3M spots, 18.3G bases, 5.4Gb downloads

External Id: GSM7744839_r1
Submitted by: CLEVELAND CLINIC LERNER COM-CWRU
Study: Distinct Transcriptional Landscapes Identified by Radiographic Response in Metastatic Triple-Negative Breast Cancer Treated with Carboplatin, Nab-Paclitaxel, and Pembrolizumab in a Single-Arm Phase II Trial
show Abstracthide Abstract
A single arm, Phase II trial of carboplatin, nab-paclitaxel, and pembrolizumab (CNP) in metastatic triple negative breast cancer (mTNBC) was designed to evaluate overall response rate (ORR), progression-free survival (PFS), duration of response (DOR), safety/tolerability, and identify pathologic and transcriptomic correlates of response to therapy. Overall design: Single arm phase II clinical trial involving treatment of mTNBC patients with carboplatin, nab-paclitaxel, and pembrolizumab (CNP) to assess the overall response rate (ORR), overall and progression-free survival (OS, PFS), and toxicity profile associated with this particular combination of chemo-immunotherapeutic agents.
Sample: R017
SAMN37188046 • SRS18736249 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: GSM7744839
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA was isolated from frozen core biopsies of primary or metastatic TNBC tissue using the Qiagen AllPrep DNA/RNA kit.Libraries were prepared using the Takara SMART-Seq v4 Ultra Low Input RNA kit and sequenced on an Illumina NovaSeq for a target of 40 million reads per sample.
Runs: 1 run, 91.3M spots, 18.3G bases, 5.4Gb
Run# of Spots# of BasesSizePublished
SRR2578275291,339,21118.3G5.4Gb2023-10-19

ID:
28988482

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