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SRX21888485: Whole-genome sequencing of pathogenic bacteria from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 825,724 spots, 476.3M bases, 271.4Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN37516890 • SRS18979472 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: BWH_1468_E_col
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 825,724 spots, 476.3M bases, 271.4Mb
Run# of Spots# of BasesSizePublished
SRR26176559825,724476.3M271.4Mb2023-09-26

ID:
29782127

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