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SRX21904964: PreXDR-TB
1 PACBIO_SMRT (Sequel II) run: 432,555 spots, 1.3G bases, 319.7Mb downloads

Design: High molecular weight DNA extraction was done using a modified method of cetyltrimethyl-ammonium bromide-sodium chloride method (CTAB)
Submitted by: Khon Kaen University
Study: Whole genome sequencing analysis of extensively drug-resistant (XDR) and pre-XDR Mycobacterium tuberculosis based on Illumina, Oxford nanopore, and Pacbio sequencing platforms
PRJNA1021585 • SRP463451 • All experiments • All runs
show Abstracthide Abstract
Next-generation sequencing (NGS) has the potential to improve our understanding of the genomic changes associated with the emerging and spread of drug-resistant tuberculosis (DR-TB). We aim to analyze the well characterized pre-XDR-TB and XDR-TB strains using the Hiseq Illumina sequencer, PromethION nanopore sequencer, and sequel II Pacbio sequencer to identify a complete genome assembly.
Sample:
SAMN37563202 • SRS18990966 • All experiments • All runs
Organism: Mycobacterium tuberculosis
Library:
Name: 15
Instrument: Sequel II
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 432,555 spots, 1.3G bases, 319.7Mb
Run# of Spots# of BasesSizePublished
SRR26193458432,5551.3G319.7Mb2024-05-26

ID:
29801405

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