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SRX22297263: RNA-Seq of Brucella abortus 2308 GMM replicate 1
1 ILLUMINA (NextSeq 500) run: 23M spots, 1.7G bases, 636Mb downloads

Design: Stranded RNA Library Construction for Prokaryotic RNA-Seq
Submitted by: Edward Via College of Osteopathic Medicine
Study: Post-transcriptional control of the essential enzyme MurF by a small regulatory RNA in Brucella abortus
show Abstracthide Abstract
Brucella abortus is a facultative, intracellular, zoonotic pathogen that resides inside macrophages during infection. This is a specialized niche where B. abortus encounters various stresses as it navigates through the macrophage. In order to survive this harsh environment, B. abortus utilizes post-transcriptional regulation of gene expression through the use of small regulatory RNAs (sRNAs). Here, we characterize a Brucella sRNAs called MavR (for MurF- and virulence-regulating sRNA), and we demonstrate that MavR is required for the full virulence of B. abortus in macrophages and in a mouse model of chronic infection. Transcriptomic and proteomic studies revealed that a major regulatory target of MavR is MurF. MurF is an essential protein that catalyzes the final cytoplasmic step in peptidoglycan synthesis; however, we did not detect any differences in the amount or chemical composition of peptidoglycan in the delta-mavR mutant. A 6-nucleotide regulatory seed region within MavR was identified, and mutation of this seed region resulted in dysregulation of MurF production, as well as significant attenuation of infection in a mouse model. Overall, the present study underscores the importance of sRNA regulation in the physiology and virulence of Brucella.
Sample: GMM replicate 1
SAMN38049774 • SRS19347998 • All experiments • All runs
Library:
Name: BA-S10
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: unspecified
Layout: SINGLE
Runs: 1 run, 23M spots, 1.7G bases, 636Mb
Run# of Spots# of BasesSizePublished
SRR2659632622,966,5871.7G636Mb2024-10-18

ID:
30264615

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