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SRX22536626: Illumina reads of Cas10-Csm complex-associated RNAs in unchallenged RP62A
1 ILLUMINA (Illumina MiSeq) run: 3.6M spots, 370.4M bases, 232.4Mb downloads

Design: The small RNA were treated with Antartic Phosphatase and PNK and libraries were constructed with the NEBNext Small RNA Sample Prep kit (NEB). The library pool was quantitated by qPCR and sequenced on one MiSeq flowcell for 151 cycles from each end of the fragments using a MiSeq 300-cycle sequencing kit version 2.
Submitted by: University of Illinois at Urbana-Champaign
Study: Anti-CRISPR protein AcrIIIA1 mitigates collateral cleavage by core Cas and accessory nucleases
show Abstracthide Abstract
CRISPR-Cas systems protect bacteria and archaea from their viruses, and Anti-CRISPRs (Acrs) are small virus-encoded proteins that inhibit CRISPR-Cas immunity. Over 80 distinct families of Acrs have been described to date; however only three of these subvert Type III CRISPR-Cas immunity. Type III systems employ a complex network of CRISPR-associated (Cas) and cellular/accessory nucleases to degrade viral nucleic acids. Here, we discover and characterize AcrIIIA1, the first Type III-A specific anti-CRISPR protein. We show that AcrIIIA1 binds to the Cas effector complex and attenuates its DNase activity and second messenger production. Additionally, AcrIIIA1 associates with fragmented tRNAs (acrRNAs) that undergo further degradation during phage infection. Our results support a two-pronged model in which AcrIIIA1 directly antagonizes core Cas machinery while acrRNAs absorb collateral damage dealt by accessory nucleases. This clever strategy remains agnostic to source(s) of indiscriminate cleavage and provides robust protection against Type III CRISPR-Cas immunity.
Sample:
SAMN38221229 • SRS19546392 • All experiments • All runs
Library:
Name: c2
Instrument: Illumina MiSeq
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 3.6M spots, 370.4M bases, 232.4Mb
Run# of Spots# of BasesSizePublished
SRR268409733,563,201370.4M232.4Mb2024-07-25

ID:
30528784

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