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SRX22633563: Recommendation of a method for harmonized antimicrobial susceptibility testing of Avibacterium paragallinarum via broth microdilution and resistance monitoring of field isolates
1 ILLUMINA (Illumina NovaSeq 6000) run: 4.5M spots, 1.3G bases, 403.6Mb downloads

Design: DNA library preparation kit
Submitted by: Royal GD Animal Health
Study: Recommendation of a method for harmonized antimicrobial susceptibility testing of Avibacterium paragallinarum via broth microdilution and resistance monitoring of field isolates
show Abstracthide Abstract
This study aimed to develop a method for harmonized broth microdilution antimicrobial susceptibility testing (AST) of Avibacterium (Av.) paragallinarum, the causative agent of infectious coryza in chickens. For this, a total of 84 Av. paragallinarum isolates and strains were collected from 15 countries. Overall, the proposed method using CAMHB_CS_NADH for susceptibility testing with 48 h incubation time at 35 degrees Celcius in ambient air was shown to be suitable for Av. paragallinarum. Due to a variety of resistance genes detected, the development of clinical breakpoints is highly recommended.
Sample:
SAMN38380415 • SRS19631480 • All experiments • All runs
Library:
Name: E06
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 4.5M spots, 1.3G bases, 403.6Mb
Run# of Spots# of BasesSizePublished
SRR269397574,460,7321.3G403.6Mb2024-11-30

ID:
30641970

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