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SRX23230256: WGS for anaerobic microbiomes
1 OXFORD_NANOPORE (GridION) run: 1.5M spots, 11.1G bases, 9Gb downloads

Design: DNA was extracted from the anaerobic reactor under hydraulic retention time of 2 d
Submitted by: The University of Hong Kong
Study: Metatranscriptomics-guided genome-scale metabolic reconstruction reveals the carbon flux and trophic interaction in methanogenic communities
PRJNA1043470 • SRP483895 • All experiments • All runs
show Abstracthide Abstract
We combined long reads sequencing and metatranscriptomics-guided metabolic reconstruction to provide a genome-wide perspective of carbon flow from polymers to methane in an anaerobic bioreactor. Long reads contributed to recover 132 MIMAGs.
Sample:
SAMN39456404 • SRS20153009 • All experiments • All runs
Organism: anaerobic digester metagenome
Library:
Name: HRT2
Instrument: GridION
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 1.5M spots, 11.1G bases, 9Gb
Run# of Spots# of BasesSizePublished
SRR275609461,454,86211.1G9Gb2024-12-20

ID:
31390584

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