RNA sequencing reads from Papiliotrema laurentii UFV-1 ATS under xylo... - SRA

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SRX23443097: RNA sequencing reads from Papiliotrema laurentii UFV-1 ATS under xylose chemostat 1
1 ILLUMINA (Illumina HiSeq 2500) run: 23.9M spots, 7.2G bases, 2.2Gb downloads

Design: For total RNA extraction, we ground three samples (n = 3) from each cultivation with liquid nitrogen using pistils for microtubes. Then, we extracted the total RNA using the TRI Reagent (Sigma-Aldrich) following the manufacturers instructions. We assessed the quality and quantity of RNA by NanoDrop (Thermo Fisher Scientific Inc.); we assessed RNA integrity by 1% agarose gel electrophoresis. Next, we sent total RNA samples to GenOne (Rio de Janeiro, Brazil) for library preparation and sequencing using the Illumina HiSeq 2500 platform with the 2 x 150 bp paired-end method.

Submitted by: Universidade Federal de Vicosa

Study: Adaptive Laboratory Evolution Papiliotrema laurentii

PRJNA879120 • SRP396610 • All experiments • All runs

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Compare the genomic features of Papiliotrema laurentii strains obtained by Adaptive Laboratory Evolution (ALE).

Sample: Papiliotrema laurentii UFV-1 ATS under xylose chemostat

SAMN39645093 • SRS20296722 • All experiments • All runs

Organism: Papiliotrema laurentii

Library:

Name: ATS_wo_1

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 23.9M spots, 7.2G bases, 2.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR27778205	23,922,507	7.2G	2.2Gb	2024-01-30

ID:: 31674259

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