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SRX23576568: Amplicon sequencing for detection of pathogens and antibiotic resistant gene: Culture
1 OXFORD_NANOPORE (MinION) run: 73 spots, 113,783 bases, 157,757b downloads

Design: Amplicon sequencing using 16S rRNA and 18S rRNA targets was performed. Library was prepared with SQL-LSK109 kit as per manufacturers instructions and sequenced on R9.4.1 flow cells.
Submitted by: HaystackAnalytics Pvt. Ltd.
Study: An integrated method for targeted Oxford Nanopore sequencing and automated bioinformatics for the simultaneous detection of bacteria, fungi and ARGs
show Abstracthide Abstract
The study describes a workflow to encourage the clinical utility and potential of next generation sequencing for the simultaneous detection of bacteria, fungi and antimicrobial resistance genes
Sample:
SAMN39862388 • SRS20421815 • All experiments • All runs
Library:
Name: HAPL_LIB_ID23_232
Instrument: MinION
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 73 spots, 113,783 bases, 157,757b
Run# of Spots# of BasesSizePublished
SRR2791786573113,783157,757b2024-07-01

ID:
31845293

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