Whole genome sequencing of Streptococcus equi subsp. zooepidemicus cl... - SRA

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SRX23891504: Whole genome sequencing of Streptococcus equi subsp. zooepidemicus clinical isolates of pig origin
1 ILLUMINA (Illumina MiSeq) run: 786,119 spots, 379M bases, 206.4Mb downloads

Design: Illumina MiSeq sequencing system with MiSeq Reagent Kit V2 using paired-end 250 bp chemistry

Submitted by: University of Veterinary Medicine, Budapest

Study: Streptococcus equi subsp. zooepidemicus isolated from diseased pigs in Hungary

PRJNA1086057 • SRP494318 • All experiments • All runs

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In August 2023 febrile disease, abortion and subsequent deaths were observed among sows kept on a small-scale organic pig farm in West Hungary. Symptoms, pathological lesions, and microbiological findings were suggestive of septicaemia of bacterial origin caused by Streptococcus equi subsp. zooepidemicus.

Sample:

SAMN40355479 • SRS20716480 • All experiments • All runs

Organism: Streptococcus equi subsp. zooepidemicus

Library:

Name: NGS-2575

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 786,119 spots, 379M bases, 206.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR28282186	786,119	379M	206.4Mb	2024-12-17

ID:: 32196292

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