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SRX24153483: UCE target enrichment of Portland1_gb_2943
1 ILLUMINA (Illumina HiSeq 2500) run: 2.1M spots, 626M bases, 266.3Mb downloads

Design: To generate the UCE dataset we performed the following steps: DNA extraction, DNA shearing, library preparation, sample pooling, UCE enrichment, and sequencing.
Submitted by: Smithsonian Institution
Study: Circumscription of the Ganaspis brasiliensis (Ihering, 1905) species complex (Hymenoptera: Figitidae), and the description of two new species parasitizing the spotted wing drosophila, Drosophila suzukii Matsumura, 1931 (Diptera: Drosophilidae)
show Abstracthide Abstract
Parasitoid wasps assigned to the species name Ganaspis brasiliensis and Ganaspis cf. brasiliensis were investigated using a molecular dataset of ultra-conserved elements (UCEs) and morphology. We report strong evidence for the presence of cryptic species based on the combination of UCE data (1379 UCE loci), host specificity, ovipositor morphology, and distribution data. We describe these new cryptic species as: Ganaspis lupini, new species, and Ganaspis kimorum, new species. Ganaspis lupini was formerly recognized as Ganaspis brasiliensis G3, and Ganaspis kimorum as Ganaspis brasiliensis G1.
Sample:
SAMN40505009 • SRS20934938 • All experiments • All runs
Organism: Leptopilina sp.
Library:
Name: Leptopilina_sp_Portland1_gb_2943
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 2.1M spots, 626M bases, 266.3Mb
Run# of Spots# of BasesSizePublished
SRR285538462,072,802626M266.3Mb2024-11-26

ID:
32464231

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