ITS amplicon raw seqences from a natural sites in Rouyn-Noranda, Can... - SRA

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SRX24033786: ITS amplicon raw seqences from a natural sites in Rouyn-Noranda, Canada
1 ILLUMINA (Illumina MiSeq) run: 115,198 spots, 57.6M bases, 32.7Mb downloads

Design: Total genomic DNA was extracted from the sample. Amplification of the ITS region was performed using a PCR approach specifically designed for Illumina instruments. The PCR reaction was purified and barcoded amplicons were pooled in equimolar concentration prior to sequencing on the illumina Miseq platform

Submitted by: Universite Laval

Study: Acid mine drainage amplicon sequencing raw reads

PRJNA1090859 • SRP497325 • All experiments • All runs

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Understanding the impact of acid mine drainage on the diversity of microbial communities associated with native plants is important for phytoremediation. In this study, the community assembly and microbial diversity associated with native plants growing along an acid mine drainage (AMD) pollution gradient were investigated

Sample: Control

SAMN40589285 • SRS20827250 • All experiments • All runs

Organism: rhizosphere metagenome

Library:

Name: Aldermac.00156.ITS

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 115,198 spots, 57.6M bases, 32.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR28429797	115,198	57.6M	32.7Mb	2024-10-04

ID:: 32340708

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