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SRX25247941: Human metagenomic next-generation sequencing
1 ILLUMINA (NextSeq 500) run: 11.5M spots, 1.7G bases, 666Mb downloads

Design: Oligo-dT
Submitted by: Affiliated Hospital of Chengde Medical College
Study: Metagenomic next-generation sequencing for the detection of pathogenic microorganisms in community-acquired pneumonia
show Abstracthide Abstract
This study assessed the diagnostic efficacy and clinical applicability of metagenomic next-generation sequencing (mNGS) compared to traditional culture methods for immunocompromised patients with community-acquired pneumonia (CAP). The results showed that mNGS had advantage over culture in identifying pathogenic microbes and mixed infections, or in individuals with negative culture.
Sample: broncho alveolar lavage fluids
SAMN42239006 • SRS21933769 • All experiments • All runs
Library:
Name: S151
Instrument: NextSeq 500
Strategy: WGS
Source: METAGENOMIC
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 11.5M spots, 1.7G bases, 666Mb
Run# of Spots# of BasesSizePublished
SRR2974693111,460,9411.7G666Mb2024-07-09

ID:
33589687

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