rpoB Gene Sequencing - SRA

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SRX25348499: rpoB Gene Sequencing
1 ILLUMINA (Illumina MiSeq) run: 112,482 spots, 32M bases, 18.3Mb downloads

Design: The complete, 3,519-bp-long rpoB gene was amplified as two partially overlapping fragments by using two primer pairs. The amplicons are proceeded for library preparations using Illumina DNA prep kit.

Submitted by: Department of Medical Research

Study: Detection of rpoB mutations missed by routine diagnostic assays using targeted sequencing in NGS

PRJNA1136681 • SRP520360 • All experiments • All runs

show Abstracthide Abstract

Rifampicin resistance conferring mutations outside the rifampicin resistance determining region (RRDR), those were missed by routine phenotypic and genotypic drug susceptibility tests, were recently detected in treatment failure cases in Myanmar.

Sample:

SAMN42539708 • SRS22015630 • All experiments • All runs

Organism: Mycobacterium tuberculosis

Library:

Name: TB24_39

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: GENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 112,482 spots, 32M bases, 18.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR29850855	112,482	32M	18.3Mb	2024-07-17

ID:: 33690987

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