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SRX26307378: Whole-genome sequencing of pathogens from a hospital setting
1 ILLUMINA (Illumina NovaSeq 6000) run: 6.6M spots, 3.3G bases, 1.1Gb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN44087763 • SRS22835801 • All experiments • All runs
Organism: Clostridioides difficile
Library:
Name: BWH-CDIFF-0000-0096-1665
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 6.6M spots, 3.3G bases, 1.1Gb
Run# of Spots# of BasesSizePublished
SRR309041906,580,1513.3G1.1Gb2024-10-07

ID:
35517402

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