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SRX2030931: Other Sequencing of Vibrio cholerae C6706
1 ILLUMINA (Illumina HiSeq 2500) run: 6M spots, 1.2G bases, 477Mb downloads

Design: Genomic DNA was isolated using ZR Fungal/Bacterial DNA MiniPrep kit (Zymo Research) and paired-end fragment libraries constructed using Nextera XT DNA Library Preparation Kit (Illumina) with a fragment length of 300bp.

Submitted by: Georgia Institute of Technology

Study: Vibrio cholerae Genome sequencing and assembly

PRJNA339415 • SRP082306 • All experiments • All runs

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Water-borne Vibrio cholerae bacteria can cause fatal cholera diarrhea. We report whole genome, ultra-deep sequencing of 24 non-clinical isolates from diverse locales, which may reveal diverse natural transformation and Type VI Secretion genes promoting fitness, pathogenicity, and exchange between bacteria.

Sample: Vibrio cholerae BH1514, Patient isolate C6706

SAMN05590424 • SRS1624989 • All experiments • All runs

Organism: Vibrio cholerae C6706

Library:

Name: BH1514

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 6M spots, 1.2G bases, 477Mb

Run	# of Spots	# of Bases	Size	Published
SRR4039815	6,012,947	1.2G	477Mb	2016-08-23

ID:: 2934869

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