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SRX2052561: Corynebacterium amycolatum IKVS53
1 ILLUMINA (Illumina MiSeq) run: 1M spots, 483M bases, 309.4Mb downloads

Submitted by: Institute of Cellular and Intracellular Symbiosis Russian Academy of Sciences (Institute of Cellular and Intracellular Symbiosis )
Study: Biosurfactants producing non-pathogenic strains Corynebacterium spp. isolated from the reproductive tract of healthy women
show Abstracthide Abstract
The genus Corynebacterium spp., also known as "diphtheroids" or "coryneform" includes more than 88 species. Of these, 53 species are occasional or extremely rare causes of diphtheria and diphtheria-like diseases in humans or are transmitted to humans by zoonotic contact. Along with the fact that microorganisms of the genus Corynebacterium play a role in the development of infection in humans, recently, the information about the important role of individual representatives of this group of microorganisms in the formation of microbiocenosis of different biotopes of the human body. Is no exception and the reproductive tract of women, where corynebacteria, according to some researchers, along with lactobacilli play an important role in maintaining colonization resistance. Along with the fact that non-pathogenic corynebacteria have their own antagonistic activity against pathogenic and conditionally pathogenic microorganisms, they potentiate the antagonistic activity of peroxide producing lactobacilli that probably is one of the key mechanisms for the protection of the reproductive tract of women from the development of infections. This project includes the non-pathogenic strains Corynebacterium spp. isolated from the reproductive tract of healthy women which has a good probiotic properties, due to the production of surfactants (biosurfactants) and increased antagonist activity of peroxide producing lactobacilli in relation to opportunistic pathogens.
Sample: Corynebacterium amycolatum ICIS 53
SAMN05601680 • SRS1644756 • All experiments • All runs
Library:
Name: Cor53_sq
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
forward1017477  reverse

Pipeline: show...hide...
ProgramVersion
TrimmomaticVersion 0.36
SPAdes3.9.0
QUAST4.0
Runs: 1 run, 1M spots, 483M bases, 309.4Mb
Run# of Spots# of BasesSizePublished
SRR40636241,017,476483M309.4Mb2017-08-24

ID:
2961803

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