Illumina MiSeq paired end sequencing of SAMD00089523 - SRA

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DRX093048: Illumina MiSeq paired end sequencing of SAMD00089523
1 ILLUMINA (Illumina MiSeq) run: 1.4M spots, 661.7M bases, 365.5Mb downloads

Submitted by: TUM-MID

Study: Molecular characterization of IMP-1 producing Enterobacter cloacae complex isolates in multi tertiary care hospital in Tokyo, Japan

PRJDB6127 • DRP003752 • All experiments • All runs

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In this study, we investigated molecular epidemiological characteristic of IMP-1-producing E. cloacae complex from 3 hospitals in Tokyo, Japan between 2007 and 2011. Phylogenetic tree of core-genome SNPs analysis of IMP-1-producing E. hormaechei ST78 showed that these isolates spread not only as intrahospital outbreak but also as regional transmission in Tokyo.

Sample: IMP-1 producing Enterobacter hormaechei subsp. steigerwaltii S175 strain TUM11143

SAMD00089523 • DRS049057 • All experiments • All runs

Organism: Enterobacter hormaechei subsp. steigerwaltii

Library:

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol:

Spot descriptor:

1 forward251 reverse

Runs: 1 run, 1.4M spots, 661.7M bases, 365.5Mb

Run	# of Spots	# of Bases	Size	Published
DRR099570	1,393,836	661.7M	365.5Mb	2017-08-16

ID:: 4386758

SRA

Sequence Read Archive

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