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SRX3358265: amplicon sequencing of anabaena: anabaena variable region 68
1 ILLUMINA (Illumina MiSeq) run: 99,411 spots, 59.8M bases, 34.1Mb downloads

Design: incorporated CS1 and CS2 linkers into forward and reverse primers, respectively
Submitted by: NUS Environmental Research Institute
Study: Comparison of bacterial 16S rRNA variable regions in cyanobacteria
show Abstracthide Abstract
Cyanobacteria blooms in freshwater often pose a threat to public health and the environment due to toxin production or taste and odour problems. Blooms can be caused by various genera of cyanobacteria and thus, characterization of the cyanobacterial community becomes critical. a mock community containing eight known species as well as complex environmental samples were studied in order to evaluate the taxonomy precision of three 16S rRNA gene variable regions (V1-3, V4-5, V6-8).
Sample: Bacteria culture_v68
SAMN07961710 • SRS2657294 • All experiments • All runs
Organism: Anabaena
Library:
Name: Csana_6
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 99,411 spots, 59.8M bases, 34.1Mb
Run# of Spots# of BasesSizePublished
SRR625127999,41159.8M34.1Mb2017-11-03

ID:
4691203

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