U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX3572119: Mapped reads for uncultivated Microbacteriaceae bacterium UBA9918 genome recovered from SRX1050772
1 ILLUMINA (Illumina HiSeq 2500) run: 83,199 spots, 15.3M bases, 4.1Mb downloads

Design: Reads from SRX1050772 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9918 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Microbacteriaceae bacterium UBA9918 genome recovered from SRX1050772
SAMN08017434 • SRS2843091 • All experiments • All runs
Organism: Microbacteriaceae bacterium
Library:
Name: UBA9918_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 83,199 spots, 15.3M bases, 4.1Mb
Run# of Spots# of BasesSizePublished
SRR648234583,19915.3M4.1Mb2018-03-05

ID:
4957621

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...