U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX3572397: Mapped reads for uncultivated Flavobacteriaceae bacterium UBA9604 genome recovered from ERX714228
1 ILLUMINA (Illumina MiSeq) run: 38,845 spots, 19.1M bases, 7.8Mb downloads

Design: Reads from ERX714228 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9604 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Flavobacteriaceae bacterium UBA9604 genome recovered from ERX714228
SAMN08017473 • SRS2843367 • All experiments • All runs
Organism: Flavobacteriaceae bacterium
Library:
Name: UBA9604_library
Instrument: Illumina MiSeq
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 38,845 spots, 19.1M bases, 7.8Mb
Run# of Spots# of BasesSizePublished
SRR648257738,84519.1M7.8Mb2018-03-05

ID:
4957899

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...