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SRX3572111: Mapped reads for uncultivated Pseudomonas sp. UBA9543 genome recovered from SRX822206
1 ILLUMINA (Illumina HiSeq 2500) run: 932,190 spots, 227.7M bases, 42.3Mb downloads

Design: Reads from SRX822206 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9543 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Pseudomonas sp. UBA9543 genome recovered from SRX822206
SAMN08018092 • SRS2843082 • All experiments • All runs
Organism: Pseudomonas sp.
Library:
Name: UBA9543_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 932,190 spots, 227.7M bases, 42.3Mb
Run# of Spots# of BasesSizePublished
SRR6482353932,190227.7M42.3Mb2018-03-05

ID:
4957613

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