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SRX3572538: Mapped reads for uncultivated Escherichia sp. UBA10503 genome recovered from SRX822039
1 ILLUMINA (Illumina HiSeq 2500) run: 148,198 spots, 36.2M bases, 7.9Mb downloads

Design: Reads from SRX822039 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10503 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Escherichia sp. UBA10503 genome recovered from SRX822039
SAMN08018561 • SRS2843508 • All experiments • All runs
Organism: Escherichia sp.
Library:
Name: UBA10503_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 148,198 spots, 36.2M bases, 7.9Mb
Run# of Spots# of BasesSizePublished
SRR6482436148,19836.2M7.9Mb2018-03-05

ID:
4958040

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