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SRX3572853: Mapped reads for uncultivated Gammaproteobacteria bacterium UBA10353 genome recovered from SRX802075
1 ILLUMINA (Illumina HiSeq 2000) run: 457,571 spots, 94.9M bases, 52.2Mb downloads

Design: Reads from SRX802075 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10353 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Gammaproteobacteria bacterium UBA10353 genome recovered from SRX802075
SAMN08018667 • SRS2843826 • All experiments • All runs
Organism: Gammaproteobacteria bacterium
Library:
Name: UBA10353_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 457,571 spots, 94.9M bases, 52.2Mb
Run# of Spots# of BasesSizePublished
SRR6483121457,57194.9M52.2Mb2018-03-05

ID:
4958355

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