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SRX3572464: Mapped reads for uncultivated Lactobacillus acetotolerans genome recovered from SRX691280
1 ILLUMINA (Illumina HiSeq 2000) run: 224,530 spots, 36.9M bases, 19.2Mb downloads

Design: Reads from SRX691280 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10993 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Lactobacillus acetotolerans genome recovered from SRX691280
SAMN08018687 • SRS2843434 • All experiments • All runs
Library:
Name: UBA10993_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 224,530 spots, 36.9M bases, 19.2Mb
Run# of Spots# of BasesSizePublished
SRR6482510224,53036.9M19.2Mb2018-03-05

ID:
4957966

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