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SRX3572678: Mapped reads for uncultivated Geobacter bacterium UBA9976 genome recovered from SRX764827
1 ILLUMINA (Illumina HiSeq 2000) run: 1M spots, 233.8M bases, 120.3Mb downloads

Design: Reads from SRX764827 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9976 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Geobacter bacterium UBA9976 genome recovered from SRX764827
SAMN08018706 • SRS2843648 • All experiments • All runs
Organism: Geobacter sp.
Library:
Name: UBA9976_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1M spots, 233.8M bases, 120.3Mb
Run# of Spots# of BasesSizePublished
SRR64828061,015,427233.8M120.3Mb2018-03-05

ID:
4958180

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