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SRX3577507: Mapped reads for uncultivated Algoriphagus bacterium UBA11868 genome recovered from ERX552285
1 ILLUMINA (Illumina HiSeq 2000) run: 134,505 spots, 26.4M bases, 13.7Mb downloads

Design: Reads from ERX552285 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11868 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Algoriphagus bacterium UBA11868 genome recovered from ERX552285
SAMN08018734 • SRS2847236 • All experiments • All runs
Library:
Name: UBA11868_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 134,505 spots, 26.4M bases, 13.7Mb
Run# of Spots# of BasesSizePublished
SRR6487778134,50526.4M13.7Mb2018-02-23

ID:
4963009

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