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SRX3576254: Mapped reads for uncultivated Rhodobacter bacterium UBA9318 genome recovered from SRX1050758
1 ILLUMINA (Illumina HiSeq 2500) run: 402,231 spots, 76.5M bases, 17.8Mb downloads

Design: Reads from SRX1050758 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9318 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Rhodobacter bacterium UBA9318 genome recovered from SRX1050758
SAMN08018756 • SRS2846136 • All experiments • All runs
Organism: Rhodobacter sp.
Library:
Name: UBA9318_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 402,231 spots, 76.5M bases, 17.8Mb
Run# of Spots# of BasesSizePublished
SRR6486153402,23176.5M17.8Mb2018-02-23

ID:
4961756

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