U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX3572118: Mapped reads for uncultivated Synergistaceae bacterium UBA9906 genome recovered from SRX997643
1 ILLUMINA (Illumina MiSeq) run: 274,863 spots, 129.5M bases, 56.1Mb downloads

Design: Reads from SRX997643 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9906 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Synergistaceae bacterium UBA9906 genome recovered from SRX997643
SAMN08019421 • SRS2843089 • All experiments • All runs
Library:
Name: UBA9906_library
Instrument: Illumina MiSeq
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 274,863 spots, 129.5M bases, 56.1Mb
Run# of Spots# of BasesSizePublished
SRR6482346274,863129.5M56.1Mb2018-03-05

ID:
4957620

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...