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SRX3577438: Mapped reads for uncultivated Thermotogae bacterium UBA12178 genome recovered from SRX1134172
1 ILLUMINA (Illumina MiSeq) run: 109,881 spots, 51.2M bases, 19.7Mb downloads

Design: Reads from SRX1134172 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA12178 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Thermotogae bacterium UBA12178 genome recovered from SRX1134172
SAMN08019497 • SRS2847165 • All experiments • All runs
Organism: Thermotogota bacterium
Library:
Name: UBA12178_library
Instrument: Illumina MiSeq
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 109,881 spots, 51.2M bases, 19.7Mb
Run# of Spots# of BasesSizePublished
SRR6487337109,88151.2M19.7Mb2018-02-23

ID:
4962940

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