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SRX3577469: Mapped reads for uncultivated Stenotrophomonas sp. UBA11197 genome recovered from SRX823277
1 ILLUMINA (Illumina HiSeq 2500) run: 237,469 spots, 45M bases, 20.4Mb downloads

Design: Reads from SRX823277 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11197 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Stenotrophomonas sp. UBA11197 genome recovered from SRX823277
SAMN08019657 • SRS2847195 • All experiments • All runs
Organism: Stenotrophomonas sp.
Library:
Name: UBA11197_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 237,469 spots, 45M bases, 20.4Mb
Run# of Spots# of BasesSizePublished
SRR6487816237,46945M20.4Mb2018-02-23

ID:
4962971

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