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SRX3577779: Mapped reads for uncultivated Cobetia bacterium UBA11601 genome recovered from ERX552292
1 ILLUMINA (Illumina HiSeq 2000) run: 283,316 spots, 51.3M bases, 29.3Mb downloads

Design: Reads from ERX552292 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11601 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Cobetia bacterium UBA11601 genome recovered from ERX552292
SAMN08019747 • SRS2847509 • All experiments • All runs
Organism: Cobetia sp.
Library:
Name: UBA11601_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 283,316 spots, 51.3M bases, 29.3Mb
Run# of Spots# of BasesSizePublished
SRR6488016283,31651.3M29.3Mb2018-02-23

ID:
4963281

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