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SRX3577385: Mapped reads for uncultivated Betaproteobacteria bacterium UBA12332 genome recovered from SRX1592544
1 ILLUMINA (Illumina HiSeq 2000) run: 1M spots, 203M bases, 104.3Mb downloads

Design: Reads from SRX1592544 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA12332 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Betaproteobacteria bacterium UBA12332 genome recovered from SRX1592544
SAMN08019760 • SRS2847112 • All experiments • All runs
Organism: Betaproteobacteria bacterium
Library:
Name: UBA12332_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1M spots, 203M bases, 104.3Mb
Run# of Spots# of BasesSizePublished
SRR64873901,032,198203M104.3Mb2018-02-23

ID:
4962887

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