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SRX3576121: Mapped reads for uncultivated Bifidobacterium bacterium UBA8026 genome recovered from SRX834654
1 ILLUMINA (Illumina HiSeq 2500) run: 120,827 spots, 21.8M bases, 10.8Mb downloads

Design: Reads from SRX834654 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA8026 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Bifidobacterium bacterium UBA8026 genome recovered from SRX834654
SAMN08020044 • SRS2846002 • All experiments • All runs
Organism: Bifidobacterium sp.
Library:
Name: UBA8026_library
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 120,827 spots, 21.8M bases, 10.8Mb
Run# of Spots# of BasesSizePublished
SRR6486286120,82721.8M10.8Mb2018-02-23

ID:
4961623

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