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SRX3572755: Mapped reads for uncultivated Psychrobacter bacterium UBA10709 genome recovered from ERX644121
1 ILLUMINA (Illumina HiSeq 2000) run: 1M spots, 178.6M bases, 84.2Mb downloads

Design: Reads from ERX644121 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA10709 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Psychrobacter bacterium UBA10709 genome recovered from ERX644121
SAMN08020074 • SRS2843725 • All experiments • All runs
Library:
Name: UBA10709_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1M spots, 178.6M bases, 84.2Mb
Run# of Spots# of BasesSizePublished
SRR64827291,042,489178.6M84.2Mb2018-03-05

ID:
4958257

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