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SRX3629311: Whole genome Illumina NextSeq sequence of Escherichia coli serovar O157:H7
1 ILLUMINA (NextSeq 500) run: 3.2M spots, 937.3M bases, 420.9Mb downloads

External Id: EXT00294304
Design: NextSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: GenomeTrakr Project: Penn State University | Department of Food Science | Dudley Lab
PRJNA357722 • SRP101500 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of cultured E. coli as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.
Sample:
SAMN08355194 • SRS2896058 • All experiments • All runs
Organism: Escherichia coli O157:H7
Library:
Name: Nextera XT library SEQ000068665
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward251  reverse

Runs: 1 run, 3.2M spots, 937.3M bases, 420.9Mb
Run# of Spots# of BasesSizePublished
SRR66517233,245,663937.3M420.9Mb2018-01-30

ID:
5024778

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