RNA-seq of Northoprocta perdicaria: adult female gonad - SRA

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SRX3686953: RNA-seq of Northoprocta perdicaria: adult female gonad
1 ILLUMINA (NextSeq 500) run: 29.7M spots, 4.5G bases, 1.9Gb downloads

Design: Flash frozen tissues stored in RNAlater at -80 C were homogenized with a Tissumizer (Tekmar). Total RNA was extracted from each specimen using the RNeasy mini kit (Qiagen). RNA samples were processed with a PrepX PolyA kit (Wafergen Biosystems) on the Apollo 324 (IntegenX) to enrich for polyadenylated transcripts. Stranded RNA-seq libraries were generated from these samples using the PrepX mRNA 48 kit (Wafergen Biosystems) on the Apollo 324.

Submitted by: Harvard University

Study: Transcriptome sequencing for genome annotation in palaeognaths

PRJNA433114 • SRP132742 • All experiments • All runs

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Transcriptome sequencing from multiple tissues from emu (Dromaius novaehollandiae) and Chilean tinamou (Nothoprocta perdicaria) to aid in genome annotation.

Sample:

SAMN08476477 • SRS2946970 • All experiments • All runs

Organism: Nothoprocta perdicaria

Library:

Name: ctin_F_gonad

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PolyA

Layout: PAIRED

Runs: 1 run, 29.7M spots, 4.5G bases, 1.9Gb

Run	# of Spots	# of Bases	Size	Published
SRR6713505	29,745,847	4.5G	1.9Gb	2018-02-12

ID:: 5092914

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