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SRX3958596: DNA-seq of Nothoprocta perdicaria
1 ILLUMINA (Illumina HiSeq 2500) run: 50.2M spots, 12.5G bases, 5.4Gb downloads

Design: Genomic DNA was extracted and prepared for sequencing using standard methods
Submitted by: Harvard University
Study: Evolutionary dynamics of sex chromosomes of palaeognathous birds
show Abstracthide Abstract
Standard models of sex chromosome evolution propose that recombination suppression leads to the degeneration of the heterogametic chromosome, as is seen for the Y chromosome in mammals and the W chromosome in most birds. Unlike other birds, palaeognaths (ratites and tinamous) possess large non-degenerate regions on their sex chromosomes (PARs or pseudoautosomal regions), despite sharing the same sex determination region as neognaths (all other birds). It remains unclear why the large PARs of palaeognaths are retained over more than 100 MY of evolution, and the impact of these large PARs on sex chromosome evolution. To address this puzzle, we analysed Z chromosome evolution and gene expression across 12 palaeognaths, several of whose genomes have recently been sequenced.
Sample:
SAMN08943272 • SRS3188921 • All experiments • All runs
Library:
Name: notPer_AJB6180
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 50.2M spots, 12.5G bases, 5.4Gb
Run# of Spots# of BasesSizePublished
SRR702636450,155,65812.5G5.4Gb2018-04-17

ID:
5422522

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