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SRX145745: 454 sequencing of non normalized cDNA library (10 individuals of Gdansk)
1 LS454 (454 GS FLX Titanium) run: 270,880 spots, 134.8M bases, 305.6Mb downloads

Submitted by: INRA
Study: De novo analysis of the marine bivalve Macoma balthica transcriptome, SNP discovery in the context of a genome scan for adaptative differentiation
show Abstracthide Abstract
transcriptome-wide scan for single nucleotide polymorphisms (SNPs) with the 454 technology, performed in preparation for a large-scale study of the maintenance and dynamics of hybrid zones in the context of global climate change. This preliminary scan for genetic markers of adaptive differentiation (1) provides data on the extreme polymorphism of M. balthica, (2) outlines loci putatively indicative of local adaptation, and (3) offers ground for discussing cytonuclear disequilibrium among M. balthica populations.
Sample: pool of 10 individuals from Gdansk, France
SAMN00990746 • SRS311954 • All experiments • All runs
Organism: Macoma balthica
Library:
Name: Gdansk
Instrument: 454 GS FLX Titanium
Strategy: EST
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Spot descriptor:
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Runs: 1 run, 270,880 spots, 134.8M bases, 305.6Mb
Run# of Spots# of BasesSizePublished
SRR493639270,880134.8M305.6Mb2012-08-03

ID:
181599

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