U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX4643851: Whole genome shotgun sequencing of FSIS11809479 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 704,098 spots, 209.8M bases, 122.2Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Enterococcus
PRJNA292669 • SRP095353 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN09977194 • SRS3741921 • All experiments • All runs
Organism: Enterococcus faecalis
Library:
Name: FSIS11809479 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11809479.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 704,098 spots, 209.8M bases, 122.2Mb
Run# of Spots# of BasesSizePublished
SRR7788943704,098209.8M122.2Mb2018-09-05

ID:
6272834

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...