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SRX3549443: Draft Genomic Sequence Of Uropathogenic Escherichia coli ATCC 700416
1 ILLUMINA (Illumina MiSeq) run: 12.7M spots, 3.5G bases, 1.1Gb downloads

Design: Illumina Paired-end sequencing of sample SAMN08347807 GENOMIC DNA
Submitted by: (BaseSpace)
Study: Draft genomic sequence of uropathogenic Escherichia coli ATCC 700416
PRJNA429461 • SRP128725 • All experiments • All runs
show Abstracthide Abstract
In recent years Uropathogenic Escherichia coli have been identified as foodborne contaminants. Isolates which are present in foods are able to cause urinary tract infections in animal model systems. Therefore it has been proposed that urinary tract infections may be a form of foodborne illness. Clinical uropathogenic E.coli are currently being used to evaluate the effectiveness of food safety technologies.
Sample: Escherichia coli Isolate 700416
SAMN08347807 • SRS2823413 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: Combination 416( v1_v2)
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: DNA extraction was performed using the Qiagen Blood tissue kit. The genomic DNA was fragmented using the Illumina Nextera Flex Kit. Sequencing was performed using the Illumina Miniseq platform.
Spot descriptor:
1  forward152  reverse

Pipeline: show...hide...
Runs: 1 run, 12.7M spots, 3.5G bases, 1.1Gb
Run# of Spots# of BasesSizePublished
SRR645919612,684,3833.5G1.1Gb2018-01-10

ID:
4930272

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