whole genome sequence of Klebsiella pneumoniae strain KZ00361153 - SRA

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SRX4906531: whole genome sequence of Klebsiella pneumoniae strain KZ00361153
1 ILLUMINA (Illumina MiSeq) run: 1.7M spots, 820.7M bases, 522.2Mb downloads

Design: Paired-end libraries (2 X 300 bp) were prepared using the Nextera XT DNA sample preparation kit (Illumina, USA)

Submitted by: National Institute for Communicable Diseases

Study: Triangulating the Molecular Epidemiology of Carbapenem-Resistant Enterobacteriaceae from Humans, Food Animals and the Environment

PRJNA477444 • SRP166148 • All experiments • All runs

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The aim of this project is to comprehensively delineate the molecular epidemiology, nature and extent of CRE in human, animal and environmental health in the “One Health” context. Our aim is to draw comparisons of CRE carriage between humans, animals environmental effluent and water within the same geographical area of UMgungundlovu, with specific emphasis on the carriage rate, type of isolates and resistance mechanisms and their associated mobile genetic elements and clonality that confer/describe carbapenem resistance

Sample:

SAMN09469774 • SRS3952658 • All experiments • All runs

Organism: Klebsiella pneumoniae

Library:

Name: 171030_M02143_0047_S3

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.7M spots, 820.7M bases, 522.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR8079358	1,662,530	820.7M	522.2Mb	2018-10-19

ID:: 6607891

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