Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX359144: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-273373' containing sample 'Staphylococcus aureus M0005'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.9M spots, 1.2G bases, 565.9Mb downloads

UUID: 3515d3d1-c476-42f3-b5a8-27e2d48c4e5a

Design: Illumina sequencing of Staphylococcus aureus M0005 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216156 • SRP030222 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0005

SAMN02325111 • SRS486805 • All experiments • All runs

Organism: Staphylococcus aureus M0005

Library:

Name: Pond-273373

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385149.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RHDL

material_type: DNA:DNA Somatic

product_order: PDO-1796

product_part_number: P-WG-0004

project: G44876

research_project: RP-433

root_sample_id: SM-4CY44

sample_id: SM-4RHDL

work_request: 37545

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-09-17 15:33:01.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.9M spots, 1.2G bases, 565.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1001473	2,914,788	588.8M	279.3Mb	2013-09-24
SRR1001474	2,983,961	602.8M	286.6Mb	2013-09-24

ID:: 507445

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