Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from Nucleotide

SRX363616: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277951' containing sample 'Staphylococcus aureus M0893'
2 ILLUMINA (Illumina HiSeq 2000) runs: 9.7M spots, 2G bases, 928.5Mb downloads

UUID: c6e33a60-200f-42ac-afd7-f5cf05ce33a5

Design: Illumina sequencing of Staphylococcus aureus M0893 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216839 • SRP030891 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0893

SAMN02325790 • SRS490246 • All experiments • All runs

Organism: Staphylococcus aureus M0893

Library:

Name: Pond-277951

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394098.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T887

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46092

research_project: RP-433

root_sample_id: SM-4C9LV

sample_id: SM-4T887

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 9.7M spots, 2G bases, 928.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010725	4,912,958	992.4M	469.2Mb	2013-10-09
SRR1010726	4,799,387	969.5M	459.4Mb	2013-10-09

ID:: 516053

SRA

Sequence Read Archive

Result Filters

Send to:

Links from Nucleotide

Supplemental Content

Related information

Recent activity