Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368133: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279987' containing sample 'Staphylococcus aureus M1422'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.4M spots, 692M bases, 312.4Mb downloads

UUID: 4df24388-8356-4f14-8347-dee80d34889b

Design: Illumina sequencing of Staphylococcus aureus M1422 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218415 • SRP032119 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1422

SAMN02350594 • SRS494174 • All experiments • All runs

Organism: Staphylococcus aureus M1422

Library:

Name: Pond-279987

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402439.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJPI

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47878

research_project: RP-433

root_sample_id: SM-4CW99

sample_id: SM-4VJPI

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.4M spots, 692M bases, 312.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017393	1,713,012	346M	156.4Mb	2013-10-25
SRR1017394	1,712,736	346M	156Mb	2013-10-25

ID:: 526764

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