Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368156: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279939' containing sample 'Staphylococcus aureus M1448'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.7M spots, 755.4M bases, 340Mb downloads

UUID: b89e671b-e508-4c68-8644-412aa2450611

Design: Illumina sequencing of Staphylococcus aureus M1448 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218436 • SRP032140 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1448

SAMN02350615 • SRS494197 • All experiments • All runs

Organism: Staphylococcus aureus M1448

Library:

Name: Pond-279939

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402391.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJO5

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47899

research_project: RP-433

root_sample_id: SM-4CW9Z

sample_id: SM-4VJO5

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.7M spots, 755.4M bases, 340Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017435	1,871,443	378M	170.4Mb	2013-10-25
SRR1017436	1,868,304	377.4M	169.7Mb	2013-10-25

ID:: 526787

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