Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX391527: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-291729' containing sample 'Staphylococcus aureus F77710'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.1M spots, 1.2G bases, 705.9Mb downloads

UUID: 1d17fc23-7db3-45e4-ba6b-5d2423bfdd32

Design: Illumina sequencing of Staphylococcus aureus F77710 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224536 • SRP033904 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus F77710

SAMN02383825 • SRS514761 • All experiments • All runs

Organism: Staphylococcus aureus F77710

Library:

Name: Pond-291729

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 427796.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:52PKV

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50591

research_project: RP-509

root_sample_id: SM-4RVHI

sample_id: SM-52PKV

work_request: 38888

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-29 16:10:35.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.1M spots, 1.2G bases, 705.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1049176	3,012,027	608.4M	351.3Mb	2013-12-13
SRR1049177	3,041,427	614.4M	354.5Mb	2013-12-13

ID:: 562281

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