Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from Nucleotide

SRX479788: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-323088' containing sample 'Staphylococcus aureus T35604'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.4M spots, 490.8M bases, 233.7Mb downloads

UUID: 6edf0bc4-762d-4858-a7ef-ffb50658c1b3

Design: Illumina sequencing of Staphylococcus aureus T35604 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226957 • SRP039217 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus T35604

SAMN02398895 • SRS565056 • All experiments • All runs

Organism: Staphylococcus aureus T35604

Library:

Name: Pond-323088

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485799.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G8PI

material_type: DNA:DNA Somatic

product_order: PDO-2425

product_part_number: P-WG-0004

project: G52030

research_project: RP-509

root_sample_id: SM-4T66W

sample_id: SM-5G8PI

work_request: 39161

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.4M spots, 490.8M bases, 233.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180616	2,429,859	490.8M	233.7Mb	2014-03-01

ID:: 669222

SRA

Sequence Read Archive

Result Filters

Send to:

Links from Nucleotide

Supplemental Content

Related information

Recent activity