Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX467892: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315490' containing sample 'Staphylococcus aureus M66410'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.5M spots, 1.1G bases, 578.1Mb downloads

UUID: 0c6d930c-80fb-4639-82aa-51099ad05deb

Design: Illumina sequencing of Staphylococcus aureus M66410 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA227699 • SRP037098 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M66410

SAMN02402623 • SRS555449 • All experiments • All runs

Organism: Staphylococcus aureus M66410

Library:

Name: Pond-315490

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 462633.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5ASRN

material_type: DNA:DNA Somatic

product_order: PDO-2503

product_part_number: P-WG-0004

project: G53983

research_project: RP-509

root_sample_id: SM-4T1KK

sample_id: SM-5ASRN

work_request: 39228

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 02:47:49.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.5M spots, 1.1G bases, 578.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1165476	2,750,001	555.5M	287.6Mb	2014-02-09
SRR1167054	2,792,986	564.2M	290.6Mb	2014-02-11

ID:: 648080

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