Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX565731: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318748' containing sample 'VET0249R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 13.4M spots, 2.7G bases, 1.3Gb downloads

UUID: 304cf37a-5572-4d32-8e4c-093dd7ab8d73

Design: Illumina sequencing of Staphylococcus aureus VET0249R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228622 • SRP042659 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0249R

SAMN02404114 • SRS626234 • All experiments • All runs

Organism: Staphylococcus aureus VET0249R

Library:

Name: Pond-318748

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471509.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLFH

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55345

research_project: RP-513

root_sample_id: SM-4Q5OP

sample_id: SM-5CLFH

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 13.4M spots, 2.7G bases, 1.3Gb

Run	# of Spots	# of Bases	Size	Published
SRR1326183	3,315,892	669.8M	327.9Mb	2014-06-03
SRR1342129	3,344,152	675.5M	331.6Mb	2014-06-05
SRR1344800	3,373,725	681.5M	333.1Mb	2014-06-06
SRR1346363	3,339,872	674.7M	333.5Mb	2014-06-06

ID:: 808548

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